msbatch2fadata

Extract FA data from an annotated msbatch.

internal

Fatty acid metabolic analysis aimed to the estimation of FA import (I), de novo synthesis (S), fractional contribution of the 13C-tracers (D0, D1, D2), elongation (E) and desaturation (Des) based on mass isotopologue data.

M Alcoriza-Balaguer

FAMetA

Fatty Acid Metabolic Analysis

Maribel Alcoriza-Balaguer

Juan Carlos Garcia-Cañaveras

Agustin Lahoz

msbatch2fadata function

<dl><dt>msbatch</dt>
<dd>annotated msbatch.</dd>
<dt>faid</dt>
<dd>data frame with two columns (ID and Compound) specifying FA ids
and FA names. FA names must be unique and omega series must be indicated
(i.e. FA(20:4)n3, FA(24:1)n9, FA(16:0)). Unknown FA series can be named as nx,
ny, nz to differentiate between isomers.</dd></dl>

Arguments

M Isabel Alcoriza-Balaguer &lt;maribel_alcoriza@iislafe.es&gt;

Author

Extract FA data from an annotated msbatch. — msbatch2fadata

<dl>

<dt>msbatch</dt>
<dd>annotated msbatch.</dd>


<dt>faid</dt>
<dd>data frame with two columns (ID and Compound) specifying FA ids
and FA names. FA names must be unique and omega series must be indicated
(i.e. FA(20:4)n3, FA(24:1)n9, FA(16:0)). Unknown FA series can be named as nx,
ny, nz to differentiate between isomers.</dd>

</dl>

msbatch2fadata: Extract FA data from an annotated msbatch.

Description

Usage

Value

Arguments

Author