BAStag2TAGS

this function converts combines twilights detected in BAStag with raw data and writes them down in TAGS format that can be easily read by <code>get.tags.data</code>

Spatio-temporal locations of an animal are computed
from annotated data with a hidden Markov model via particle
filter algorithm. The package is relatively robust to varying
degrees of shading.
The hidden Markov model is described in Movement Ecology - Rakhimberdiev et al. (2015) <doi:10.1186/s40462-015-0062-5>,
general package description is in the Methods in Ecology and Evolution - Rakhimberdiev et al. (2017) <doi:10.1111/2041-210X.12765>
and package accuracy assessed in the Journal of Avian Biology - Rakhimberdiev et al. (2016) <doi:10.1111/jav.00891>.

Eldar Rakhimberdiev

FLightR

Reconstruct Animal Paths from Solar Geolocation Loggers Data

Anatoly Saveliev

Julia Karagicheva

Simeon Lisovski

Johannes de Groeve

BAStag2TAGS function

<dl><dt>raw</dt>
<dd>original data - dataframe with two columns first column must contain time and second measured light levels</dd>
<dt>twl</dt>
<dd>twilights object from <code>preprocess.light</code> function</dd>
<dt>threshold</dt>
<dd>threshold value used for twilight definition in <code>preprocess.light</code></dd>
<dt>filename</dt>
<dd>if NULL data.frame in TAGS format will be returned otherwise .csv file in TAGS format will be written</dd></dl>

Arguments

Eldar Rakhimberdiev &amp; Simeon Lisovski

Author

Function to write down twilights annotated in BAStag package data in so-called TAGS format — BAStag2TAGS

<dl>

<dt>raw</dt>
<dd>original data - dataframe with two columns first column must contain time and second measured light levels</dd>


<dt>twl</dt>
<dd>twilights object from <code>preprocess.light</code> function</dd>


<dt>threshold</dt>
<dd>threshold value used for twilight definition in <code>preprocess.light</code></dd>


<dt>filename</dt>
<dd>if NULL data.frame in TAGS format will be returned otherwise .csv file in TAGS format will be written</dd>

</dl>

BAStag2TAGS: Function to write down twilights annotated in BAStag package data in so-called TAGS format

Description

Usage

Value

Arguments

Author

Details

See Also