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FSAdata (version 0.3.0)

Data to Support Fish Stock Assessment (FSA) Package

Description

The datasets to support the ``Fish Stock Assessment'' (FSA) package.

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Install

install.packages('FSAdata')

Monthly Downloads

1,460

Version

0.3.0

License

GPL (>= 2)

Issues

Pull Requests

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Repository

https://github.com/droglenc/FSAdata

Homepage

http://derekogle.com/fishR/

Maintainer

Derek Ogle

Last Published

October 6th, 2015

Functions in FSAdata (0.3.0)

BassFL

Catch-at-age for Suwanee and Largemouth Bass.

Croaker2

Ages, lengths, and sexes of Atlantic Croaker by sex.

Croaker1

Ages of Atlantic Croaker assigned from otoliths by two readers.

CiscoTL

Lengths and weights of Cisco from Trout Lake.

BlueCatfish

Ages and lengths of Blue Catfish.

BrookTroutNEWP1

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.

RBTroutKenai

Length-at-marking and recapture and time-at-large of Rainbow Trout.

RBTroutUNSP

Capture histories (2 sample) of Rainbow Trout.

KingCrabAK

Stock and recruitment data for Red King Crab in Alaska.

StripedBass6

Ages of Striped Bass assigned from scales and otoliths.

RuffeTL89

Lengths of Ruffe captured July, 1989.

WalleyePS

Ages of Walleye assigned from otoliths, scales, and spines.

BlueCrab

Catch and effort data for male Blue Crabs.

WalleyeRL

Growth increment data for Red Lakes Walleye.

TroutBR

Ages and lengths of migratory Brown and Rainbow Trout.

WalleyeMN06b

Summarized multiple mark-recapture data for Walleye from four lakes in Northern Minnesota.

LobsterHI

Catch and effort data for Hawaiian Islands Slipper Lobster.

Morwong2

Ages of Morwong assigned from otoliths by Reader B at two times.

AlewifeLH

Ages of Lake Huron Alewife assigned from otoliths and scales.

BluntnoseIL1

Lengths of Bluntnose Minnows (subsample) captured in Inch Lake

FSAdata

Data to support the FSA package.

InchLake1

Lengths of fish captured in Inch Lake

Lizardfish

Stock and recruitment data for Greater Lizardfish, 1955-1964.

RockBassLO1

Ages and lengths of Lake Ontario Rock Bass.

DarterOnt

Ages and lengths of Channel Darters from two locations.

HerringISS

Stock and recruitment data for Icelandic summer spawning Herring, 1946-1996.

SpottedSucker1

Ages and lengths of Spotted Sucker.

LakeTroutEggs

Length and egg deposition of Lake Superior Lake Trout.

HerringBWE

Stock and recruitment data for Blackwater Estuary Herring.

BullTroutTC

Catch-at-age for Bull Trout in Trestle Creek, ID.

Ghats

Species accumulation data for fish of the Western Ghats of India.

RuffeSLRH92

Biological characteristics of Ruffe captured in the St. Louis River, Lake Superior in 1992.

BluegillLM

Length and weight of Bluegill from Lake Mary, MN.

BloaterLH

Stock and recruitment data for Lake Huron Bloaters.

RockBassLO2

Age (subsample) and length (all fish) of Rock Bass from Lake Ontario.

SnapperHG1

Age (subsample) and length (all fish) of Snapper from two survey locations.

SunfishIN

Summarized multiple mark-recapture data for Redear Sunfish.

StripedBass3

Age (subsample) and length (all fish) of Striped Bass.

SockeyeKL

Stock and recruitment data for Sockeye Salmon from Karluk Lake, AK, 1921-1948.

SockeyeSR

Stock and recruitment data for Skeena River Sockeye Salmon.

Hake

Stock and recruitment data for Hake.

InchLake2

Lengths and weights of fish captured in Inch Lake

EuroPerchTJ

Ages, lengths, and sexes of European Perch.

Cabezon

Ages, lengths, and maturity of female Cabezon from Oregon.

Pallid

Lengths and weights of Pallid Sturgeon from the Missouri River.

WalleyeMN06a

Catch-at-age for Walleye.

ChinookKR

Stock and recruitment data for Klamath River Chinook Salmon.

PikeHL

Capture histories (2 samples) of Northern Pike from Harding Lake.

BSkateGB

Stock and recruitment data for Barndoor Skate from Georges Bank.

Pathfinder

Catch and effort for three Snapper species in a depletion experiment.

SardineChile

Ages and lengths of two year-classes of Sardine from Chilean waters.

Riffleshell

Summarized multiple mark-recapture data for Tan Riffleshell.

RedDrum

Ages and lengths of Red Drum.

Casselman1990

Instantaneous growth rates for two calcified ageing structures.

CutthroatALf

Capture histories (9 samples) of Cutthroat Trout from Auke Lake.

FHCatfishATL

Catch-at-age of Flathead Catfish from three Atlantic rivers.

FHCatfish

Catch-at-age of Flathead Catfish from three southeastern rivers.

TroutperchLM3

Lengths of Troutperch (subsampled) in Lake Michigan, 1977.

.onAttach

Internal functions used in FSAdata.

Morwong4a

Age (subsample) and length (all fish) of Morwong from Morwong4.

LMBassLCB

Lengths of Largemouth Bass from Lake Carl Blackwell.

LakeTroutALTER

Biological characteristics of Lake Trout from Arctic LTER.

SardinesPacific

Stock and recruitment data for Pacific Sardines, 1935-1990.

WhitefishGSL

Catch-at-age of Great Slave Lake Whitefish (commercial) by area.

VendaceLP2

Stock and recruitment data for Vendace from Lake Pyhajarvi.

PikeWindermere

Stock and recruitment data for Northern Pike from Lake Windermere.

SculpinALTER

Biological characteristics of Slimy Sculpin from the Arctic LTER.

PikeIL

Catch and effort data for Northern Pike from Island Lake, NB.

TroutperchLM2

Lengths of Troutperch in Lake Michigan, 1977.

YPerchGL

Lengths and weights of Yellow Perch from Grafton Lake by year.

Menhaden1

Catch-at-age for Gulf Menhaden, 1964-2004.

WalleyeErie

Recruitment time-series for Walleye in Lake Erie, 1959-1972.

ShrimpGuam

Catch and effort data for Deepwater Caridean Shrimp.

SnapperHG2

Age (subsample) and length (all fish) of Snapper.

SalmonidsMCCA

Catches in removal events of Cutthroate Trout and Steelhead of various sizes in two reaches of McGarvey Creek (CA).

SpotVA2

Age (subsample) and length (all fish) of Spot.

TroutperchLM1

Ages, lengths, and sexes of Troutperch.

SimonsonLyons

Catches in removal events of trout at various locations.

TroutADP

Catches in removal events of trout.

VendaceLP

Stock and recruitment data for Vendace from Lake Puulavesi, 1982-1996.

WalleyeEL

Stock and recruitment data for Walleye from Escanaba Lake, WI, 1958-1992.

WShrimpGA

Stock and recruitment data for White Shrimp off the coast of Georgia (USA), 1979-2000.

WalleyeML

Back-calculated lengths-at-age for Walleye from Lake Mille Lacs, 2000-2011.

StripedBass1

Ages of Striped Bass assigned from scales and otoliths.

TPrawnsEG

Stock and recruitment data for Exmouth Gulf Tiger Prawn.

WalleyeConsumption

Consumption of prey by Walleye.

RockBassCL

Catch-at-age of Cayuga Lake Rock Bass.

BluefishAge

Ages of Bluefish assigned from otoliths by two readers.

YERockfish

Ages, lengths, and maturity for Yelloweye Rockfish.

YPerchSB

Stock and recruitment data for Yellow Perch from South Bay, Lake Huron, 1950-1983.

YPerchCB1

Catch-at-age for Yellow Perch from Chequamegon Bay, Lake Superior.

SalmonADP

Catches in removal events of salmon parr.

LobsterPEI

Catch and effort data for Prince Edward Island Lobster.

StripedBass2

Ages and lengths of Atlantic Ocean Striped Bass.

AfricanRivers

Characteristics of a sample of West African rivers.

WhitefishMB

Ages of Lake Whitefish from four lakes assigned from scales and fin-rays.

Deckeretal1999

Catches in removal events of Cutthroat Trout and Coho Salmon in Little Stawamus Creek (British Columbia, Canada) in 1997.

AHerringChile

Ages and lengths of Araucanian Herring from Chilean waters.

BrookTroutNC

Stock and recruitment data for Brook Trout from Ball Creek, NC.

WalleyePL

Summarized multiple mark-recapture data for YOY walleye.

JonesStockwell

Catches in removal events of Brown and Rainbow Trout at various locations.

HumpbackWFCR

Capture histories (2 sample) of Humpback Whitefish.

Morwong3

Ages of Morwong assigned from otoliths by two readers.

FWDrumLE1

Ages and lengths of Lake Erie Freshwater Drum.

LJCisco

Ages and lengths of Longjaw Cisco from two locations in Lake Michigan.

PSalmonAK

Stock and recruitment data for Alaskan Pink Salmon, 1960-1990.

LakeTroutMI

Stock and recruitment data for Lake Trout in Lake Superior.

MuskieSLR

Ages of Muskellunge assigned from scales and cleithra.

RBSmeltLM

Lengths of Rainbow Smelt in Lake Michigan, 1977.

WalleyeErie2

Biological data from Walleye in Lake Erie, 2003-2014.

GreensCreekMine

Catches in removal events of Coho Salmon and Dolly Varden Char at various locations near the Greens Creek (AK) Mine site.

JobfishSIO

Catch and effort data for South Indian Ocean Jobfish.

BullTroutRML1

Lengths and weights for Bull Trout from two Rocky Mountain lakes.

SunfishLP

Catch-at-age for Bluegill and Redear Sunfish in Florida.

BrookTroutNEWP

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.

BullTroutRML2

Ages and lengths of Bull Trout from two Rocky Mountain lakes at two times.

LMBassBL

Lengths of Largemouth Bass from Boomer Lake.

Snapper

Lengths of Snapper captured by trawl in Australia.

CrappieARMS

Stock and recruitment data for Crappies from four reservoirs in Arkansas and Mississippi, USA.

YPerchSB1

Lengths of Yellow Perch from Saginaw Bay, Lake Michigan.

DarterMahon

Catch and effort data for Fantail Darter.

WhiteGrunt1

Catch-at-age for White Grunt.

HalibutPAC

Stock and recruitment data for Pacific Halibut, 1929-1991.

Morwong1

Ages of Morwong assigned from otoliths by Reader A at two times.

Morwong4

Ages and lengths of Morwong.

AnchovetaChile

Ages and lengths of Anchoveta from Chilean waters.

StripedBass5

Ages of Striped Bass assigned from otoliths by two readers.

YPerchCB2

Stock and recruitment data for Yellow Perch in Chequamegon Bay, 1975-1986.

PikeNYPartial2

Capture histories (4 samples) of a subset of Northern Pike from Buckthorn Marsh.

YTFlounder

Ages of Yellowtail Flounder assigned from scales and otoliths.

BrookTroutOnt

Summarized single mark-recapture data for Brook Trout across many years.

FWDrumLE2

Age (subsample) and length (all fish) of Freshwater Drum from Lake Erie.

YPerchTL

Lengths and weights of Yellow Perch from Trout Lake.

MulletBS

Ages of Red Mullet assigned from whole and broken-burnt otoliths.

MuskieWI06MR

Summarized mark-recapture data for Muskellunge from many Wisconsin Lakes, 2006.

PygmyWFBC

Biological information from Pygmy Whitefish from Dina Lake #1 (British Columbia), 2000 and 2001.

SLampreyGL

Stock and recruitment data for Sea Lamprey in the Great Lakes.

Jonubi1

Ages and lengths of male Jonubi.

RBSmeltErie

Recruitment time-series for Rainbow Smelt in Lake Erie, 1977-1996.

SardineLK

Ages and lengths of larval Lake Tanganyika Sardine.

WhiteGrunt2

Ages, lengths, and sexes of White Grunt.

RWhitefishIR

Ages and lengths of Round Whitefish.

RWhitefishAI

Ages and lengths of Round Whitefish.

SturgeonBL

Summarized multiple mark-recapture data for Lake Sturgeon.

WhitefishLS

Landings and value of Lake Superior Lake Whitefish.

WhitefishTB

Stock and recruitment data for Lake Whitefish in Thunder Bay, Lake Superior, 1975-1988.

YPerchGB

Recruitment time-series for Yellow Perch in Green Bay, 1978-1992.

YPerchRL

Recruitment time-series for Yellow Perch in Red Lakes, MN, 1942-1960.

BrownTroutVC1

Single census mark-recapture data with lengths for Brown Trout from Valley Creek, MN.

CreelMN

Results of a large number of creel surveys in Minnestoa lakes.

Herman

Lengths of four species from Lake Herman, SD.

Jonubi2

Age (subsample) and length (all fish) of Jonubi.

LakeTroutGIS

Stock and recruitment data for Lake Trout from Gull Island Shoal, Lake Superior, 1964-1991.

StripedBass4

Ages of Striped Bass assigned from scales by two readers.

WalleyeKS

Catch-at-age for Walleye from eight Kansas reservoirs.