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FSAdata (version 0.3.3)

Data to Support Fish Stock Assessment (FSA) Package

Description

The datasets to support the Fish Stock Assessment (FSA) package.

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Version

Install

install.packages('FSAdata')

Monthly Downloads

902

Version

0.3.3

License

GPL (>= 2)

Issues

Pull Requests

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Repository

https://github.com/droglenc/FSAdata

Homepage

http://derekogle.com/fishR/

Maintainer

Derek Ogle

Last Published

July 18th, 2016

Functions in FSAdata (0.3.3)

BloaterLH

Stock and recruitment data for Lake Huron Bloaters, 1981-1996.

AHerringChile

Ages and lengths of Araucanian Herring from Chilean waters.

BGHRsample

Information for each electrofishing sample from Big Hill Reservoir, KS, 2014.

BlueCatfish

Ages and lengths of Blue Catfish.

BassFL

Catch-at-age for Suwanee and Largemouth Bass.

BGHRfish

Fish information from samples collected from Big Hill Reservoir, KS, 2014.

AfricanRivers

Characteristics of a sample of West African rivers.

AnchovetaChile

Ages and lengths of Anchoveta from Chilean waters.

AlewifeLH

Ages of Lake Huron Alewife assigned from otoliths and scales.

BlackDrum2001

Biological data for Black Drum from Virginia waters of the Atlantic Ocean, 2001.

BlueCrab

Catch and effort data for male Blue Crabs.

BluefishAge

Ages of Bluefish assigned from otoliths by two readers.

BrookTroutOnt

Summarized single mark-recapture data for Brook Trout across many years.

BrookTroutNEWP1

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.

BrookTroutNEWP

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.

BrownTroutVC1

Single census mark-recapture data with lengths for Brown Trout from Valley Creek, MN.

Bonito

Ages and lengths of Australian Bonito.

BluegillLM

Lengths and weights for Bluegill from Lake Mary, MN.

BrookTroutNC

Stock and recruitment data for Brook Trout from Ball Creek, NC, 1991-2004.

BluntnoseIL1

Subampled lengths of Bluntnose Minnows from Inch Lake, WI.

CiscoTL

Lengths, weights, and sex of Cisco from Trout Lake, WI.

CCatfishNB

Catch-at-age of Channel Catfish from two sections of the Platte River, NB.

CrappieARMS

Stock and recruitment data for Crappies from four reservoirs in Arkansas and Mississippi, USA.

ChinookKR

Stock and recruitment data for Klamath River Chinook Salmon, 1979-2000.

BSkateGB

Stock and recruitment data for Barndoor Skate from Georges Bank, 1966-2007.

BullTroutTC

Catch-at-age for Bull Trout in Trestle Creek, ID.

BullTroutRML2

Ages and lengths of Bull Trout from two Rocky Mountain lakes at two times.

BullTroutRML1

Lengths and weights for Bull Trout from two Rocky Mountain lakes and two eras.

Casselman1990

Instantaneous growth rates for two calcified ageing structures.

Cabezon

Ages, lengths, and maturity for female Cabezon from Oregon.

CreekChub

Ages (subsample) and lengths (all fish) for Creek Chub.

DarterMahon

Catch and effort data for Fantail Darter.

CutthroatALf

Capture histories (9 samples) of Cutthroat Trout from Auke Lake.

CreelMN

Results of a large number of creel surveys in Minnestoa lakes.

FWDrumLE2

Ages (subsample) and lengths (all fish) for Freshwater Drum from Lake Erie.

Deckeretal1999

Catches in removal events of Cutthroat Trout and Coho Salmon in Little Stawamus Creek (British Columbia, Canada) in 1997.

DarterOnt

Ages and lengths of Channel Darters from two locations.

InchLake1

Lengths for all fish captured in Inch Lake, WI, in two years

HumpbackWFCR

Capture histories (2 sample) of Humpback Whitefish.

Ghats

Species accumulation data for fish of the Western Ghats of India.

EuroPerchTJ

Ages, lengths, and sexes of European Perch.

FHCatfish

Catch-at-age of Flathead Catfish from three southeastern rivers.

FWDrumLE1

Ages and lengths of Lake Erie Freshwater Drum.

Jonubi1

Ages and lengths of male Jonubi.

JonesStockwell

Catches in removal events of Brown and Rainbow Trout at various locations.

FSAdata

Data to support the FSA package.

HerringBWE

Stock and recruitment data for Blackwater Estuary Herring, 1962-1997.

Hake

Stock and recruitment data for Hake, 1982-1996.

GreensCreekMine

Catches in removal events of Coho Salmon and Dolly Varden Char at various locations near the Greens Creek (AK) Mine site.

HerringISS

Stock and recruitment data for Icelandic summer spawning Herring, 1946-1996.

MuskieSLR

Ages of Muskellunge assigned from scales and cleithra.

MuskieWI06MR

Summarized mark-recapture data for Muskellunge from many Wisconsin Lakes, 2006.

Morwong4

Ages and lengths of Morwong.

LMBassBL

Lengths for Largemouth Bass from Boomer Lake, OK.

LMBassLCB

Lengths for Largemouth Bass from Lake Carl Blackwell, OK.

Pallid

Lengths and weights for Pallid Sturgeon from four locations in the Missouri River.

Morwong4a

Ages (subsample) and lengths (all fish) for Morwong from Morwong4.

Pathfinder

Catch and effort for three Snapper species in a depletion experiment.

RWhitefishAI

Ages and lengths of Round Whitefish.

RuffeTL89

Lengths of Ruffe captured from the St. Louis River in July, 1989.

Morwong2

Ages of Morwong assigned from otoliths by Reader B at two times.

Lizardfish

Stock and recruitment data for Greater Lizardfish, 1955-1964.

LJCisco

Ages and lengths of Longjaw Cisco from two locations in Lake Michigan.

RedDrum

Ages and lengths for Red Drum from the Atlantic Coast.

RBSmeltLM

Lengths for Rainbow Smelt from Lake Michigan, 1977.

RBSmeltErie

Recruitment time-series for Rainbow Smelt in Lake Erie, 1977-1996.

Morwong3

Ages of Morwong assigned from otoliths by two readers.

SpottedSucker1

Ages and lengths of Spotted Sucker.

SockeyeSR

Stock and recruitment data for Skeena River Sockeye Salmon, 1940-1967.

Riffleshell

Summarized multiple mark-recapture data for Tan Riffleshell.

LobsterPEI

Catch and effort data for Prince Edward Island Lobster.

LobsterHI

Catch and effort data for Hawaiian Islands Slipper Lobster.

Menhaden1

Catch-at-age for Gulf Menhaden, 1964-2004.

SalmonidsMCCA

Catches in removal events of Cutthroate Trout and Steelhead of various sizes in two reaches of McGarvey Creek (CA).

Morwong1

Ages of Morwong assigned from otoliths by Reader A at two times.

SLampreyGL

Stock and recruitment data for Sea Lamprey in the Great Lakes, 1997-2007.

SiscowetMI2004

Ages (subsample) and lengths (all fish) for male and female Siscowet Lake Trout captured at four locations in Michigan waters of Lake Superior.

SardineChile

Ages and lengths of two year-classes of Sardine from Chilean waters.

StripedBass2

Ages and lengths of Atlantic Ocean Striped Bass.

StripedBass3

Ages (subsample) and lengths (all fish) for Striped Bass.

KingCrabAK

Stock and recruitment data for Red King Crab in Alaska, 1960-2004.

Jonubi2

Ages (subsample) and lengths (all fish) of Jonubi.

FHCatfishATL

Catch-at-age of Flathead Catfish from three Atlantic rivers.

.onAttach

Internal functions used in FSAdata.

PikeHL

Capture histories (2 samples) of Northern Pike from Harding Lake.

LakeTroutGIS

Stock and recruitment data for Lake Trout from Gull Island Shoal, Lake Superior, 1964-1991.

LakeTroutMI

Stock and recruitment data for Lake Trout in Lake Superior, 1971-1991.

RockBassLO1

Ages and lengths of Lake Ontario Rock Bass.

RockBassCL

Catch-at-age of Cayuga Lake Rock Bass.

PikeIL

Catch and effort data for Northern Pike from Island Lake, NB.

SardineLK

Ages and lengths of larval Lake Tanganyika Sardine.

SturgeonGB

Capture years and ages for Lake Sturgeon from Goulais Bay, Lake Superior, Ont.

SockeyeKL

Stock and recruitment data for Sockeye Salmon from Karluk Lake, AK, 1921-1948.

SnapperHG2

Ages (subsample) and lengths (all fish) for Snapper.

SardinesPacific

Stock and recruitment data for Pacific Sardines, 1935-1990.

SunfishIN

Summarized multiple mark-recapture data for Redear Sunfish.

WalleyeEL

Stock and recruitment data for Walleye from Escanaba Lake, WI, 1958-1992.

WalleyeRL

Growth increment data for Red Lakes Walleye.

WalleyeErie

Recruitment time-series for Walleye in Lake Erie, 1959-1972.

WalleyePS

Ages of Walleye assigned from otoliths, scales, and spines.

TroutperchLM1

Ages, lengths, and sexes of Troutperch.

YPerchCB2

Stock and recruitment data for Yellow Perch in Chequamegon Bay, 1975-1986.

TroutperchLM2

Lengths for Troutperch from Lake Michigan, 1977.

YPerchCB1

Catch-at-age for Yellow Perch from Chequamegon Bay, Lake Superior.

SalmonADP

Catches in removal events of salmon parr.

RWhitefishIR

Ages and lengths of Round Whitefish.

SunfishLP

Catch-at-age for Bluegill and Redear Sunfish in Florida.

TPrawnsEG

Stock and recruitment data for Exmouth Gulf Tiger Prawn, 1970-83.

WalleyeKS

Catch-at-age for Walleye from eight Kansas reservoirs.

WalleyeErie2

Biological data for Walleye from Lake Erie, 2003-2014.

YPerchSB1

Lengths for Yellow Perch from two locations in Saginaw Bay, Lake Michigan.

WhitefishGSL

Catch-at-age of Great Slave Lake Whitefish (commercial) by area.

WhitefishLS

Landings and value of Lake Superior Lake Whitefish.

VendaceLP2

Stock and recruitment data for Vendace from Lake Pyhajarvi.

WalleyeConsumption

Consumption of prey by Walleye.

YPerchTL

Lengths and weights for Yellow Perch from Trout Lake, WI.

WalleyeMN06b

Summarized multiple mark-recapture data for Walleye from four lakes in Northern Minnesota.

WhiteGrunt1

Catch-at-age for White Grunt.

WalleyePL

Summarized multiple mark-recapture data for YOY walleye.

WhiteGrunt2

Ages, lengths, and sexes of White Grunt.

YPerchGL

Lengths and weights of Yellow Perch from Grafton Lake (ME) by year.

YPerchGB

Recruitment time-series for Yellow Perch in Green Bay, 1978-1992.

RuffeSLRH92

Biological data for Ruffe captured from the St. Louis River in 1992.

RockBassLO2

Ages (subsample) and lengths (all fish) for Rock Bass from Lake Ontario.

PikeWindermere

Stock and recruitment data for Northern Pike from Lake Windermere, 1944-1981.

PikeNYPartial2

Capture histories (4 samples) of a subset of Northern Pike from Buckthorn Marsh.

Snapper

Lengths for Snapper from Australia.

ShadCR

Ages of American Shad assigned from scales by three readers at two times.

SnapperHG1

Age (subsample) and length (all fish) of Snapper from two survey locations.

SculpinALTER

Biological data for Slimy Sculpin from the Arctic LTER (AK).

StripedBass6

Ages of Striped Bass assigned from scales and otoliths.

SturgeonBL

Summarized multiple mark-recapture data for Lake Sturgeon.

TroutADP

Catches in removal events of trout.

WalleyeMN06a

Catch-at-age for Walleye.

WalleyeML

Back-calculated lengths-at-age for Walleye from Lake Mille Lacs, 2000-2011.

TroutBR

Ages and lengths of migratory Brown and Rainbow Trout.

YPerchSB

Stock and recruitment data for Yellow Perch from South Bay, Lake Huron, 1950-1983.

YPerchRL

Recruitment time-series for Yellow Perch in Red Lakes, MN, 1942-1960.

YERockfish

Ages, lengths, and maturity for Yelloweye Rockfish.

WShrimpGA

Stock and recruitment data for White Shrimp off the coast of Georgia (USA), 1979-2000.

YTFlounder

Ages of Yellowtail Flounder assigned from scales and otoliths.

HalibutPAC

Stock and recruitment data for Pacific Halibut, 1929-1991.

Croaker2

Ages, lengths, and sexes of Atlantic Croaker by sex.

Croaker1

Ages of Atlantic Croaker assigned from otoliths by two readers.

Herman

Lengths for Walleye, Yellow Perch, Black Crappie, and Black Bullheads from Lake Herman, SD.

InchLake2

Lengths and weights for fish captured in Inch Lake

JobfishSIO

Catch and effort data for South Indian Ocean Jobfish.

LakeTroutALTER

Biological data for Lake Trout from the Arctic LTER (AK).

LakeTroutEggs

Length and egg deposition of Lake Superior Lake Trout.

Mosquitofish

Ages and lengths of Eastern Mosquitofish from ten locations from souther France to southern Spain.

MulletBS

Ages of Red Mullet assigned from whole and broken-burnt otoliths.

PSalmonAK

Stock and recruitment data for Alaskan Pink Salmon, 1960-1990.

RBTroutKenai

Length-at-marking and recapture and time-at-large of Rainbow Trout.

PygmyWFBC

Biological data for Pygmy Whitefish from Dina Lake #1 (British Columbia), 2000 and 2001.

RBTroutUNSP

Capture histories (2 sample) of Rainbow Trout.

SpotVA2

Ages (subsample) and lengths (all fish) for Spot.

ShrimpGuam

Catch and effort data for Deepwater Caridean Shrimp.

SimonsonLyons

Catches in removal events of trout at various locations.

StripedBass1

Ages of Striped Bass assigned from scales and otoliths.

StripedBass4

Ages of Striped Bass assigned from scales by two readers.

StripedBass5

Ages of Striped Bass assigned from otoliths by two readers.

VendaceLP

Stock and recruitment data for Vendace from Lake Puulavesi, 1982-1996.

TroutperchLM3

Subsampled lengths of Troutperch from Lake Michigan, 1977.

WalleyeWyrlng

Annual catches of yearling Walleye in bottom trawls from Lake Winnebago, WI, 1986-2010.

WalleyeWad

Catches-at-age for male and female Walleye from Lake Winnebago, WI, 2010.

WhitefishMB

Ages of Lake Whitefish from four lakes assigned from scales and fin-rays.

WhitefishTB

Stock and recruitment data for Lake Whitefish in Thunder Bay, Lake Superior, 1975-1988.