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FSAdata (version 0.3.6)

Data to Support Fish Stock Assessment ('FSA') Package

Description

The datasets to support the Fish Stock Assessment ('FSA') package.

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Install

install.packages('FSAdata')

Monthly Downloads

972

Version

0.3.6

License

GPL (>= 2)

Issues

Pull Requests

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Repository

https://github.com/droglenc/FSAdata

Homepage

http://derekogle.com/fishR/

Maintainer

Derek Ogle

Last Published

March 10th, 2017

Functions in FSAdata (0.3.6)

BGHRfish

Fish information from samples collected from Big Hill Reservoir, KS, 2014.

BGHRsample

Information for each electrofishing sample from Big Hill Reservoir, KS, 2014.

BrookTroutNEWP

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.

BrookTroutNEWP1

Catches in removal events for Brook Trout in the Nashwaak Experimental Watersheds Project.

BullTroutTC

Catch-at-age for Bull Trout in Trestle Creek, ID.

BlackDrum2001

Biological data for Black Drum from Virginia waters of the Atlantic Ocean, 2001.

BloaterLH

Stock and recruitment data for Lake Huron Bloaters, 1981-1996.

CreelMN

Results of a large number of creel surveys in Minnestoa lakes.

CCatfishNB

Catch-at-age of Channel Catfish from two sections of the Platte River, NB.

Croaker1

Ages of Atlantic Croaker assigned from otoliths by two readers.

JobfishSIO

Catch and effort data for South Indian Ocean Jobfish.

BluegillLM

Lengths and weights for Bluegill from Lake Mary, MN.

JonesStockwell

Catches in removal events of Brown and Rainbow Trout at various locations.

BluntnoseIL1

Subampled lengths of Bluntnose Minnows from Inch Lake, WI.

Croaker2

Ages, lengths, and sexes of Atlantic Croaker by sex.

LMBassBL

Lengths for Largemouth Bass from Boomer Lake, OK.

LMBassLCB

Lengths for Largemouth Bass from Lake Carl Blackwell, OK.

Mosquitofish

Ages and lengths of Eastern Mosquitofish from ten locations from southern France to southern Spain.

Riffleshell

Summarized multiple mark-recapture data for Tan Riffleshell.

Morwong4a

Ages (subsample) and lengths (all fish) for Morwong from Morwong4.

RockBassCL

Catch-at-age of Cayuga Lake Rock Bass.

CutthroatALf

Capture histories (9 samples) of Cutthroat Trout from Auke Lake.

SalmonidsMCCA

Catches in removal events of Cutthroate Trout and Steelhead of various sizes in two reaches of McGarvey Creek (CA).

SardineChile

Ages and lengths of two year-classes of Sardine from Chilean waters.

ShrimpGuam

Catch and effort data for Deepwater Caridean Shrimp.

SimonsonLyons

Catches in removal events of trout at various locations.

Hake

Stock and recruitment data for Hake, 1982-1996.

AlewifeLH

Ages of Lake Huron Alewife assigned from otoliths and scales.

AnchovetaChile

Ages and lengths of Anchoveta from Chilean waters.

BluefishAge

Ages of Bluefish assigned from otoliths by two readers.

StripedBass3

Ages (subsample) and lengths (all fish) for Striped Bass.

StripedBass4

Ages of Striped Bass assigned from scales by two readers.

WalleyeMN06b

Summarized multiple mark-recapture data for Walleye from four lakes in Northern Minnesota.

BluegillIL

Length-at-marking and recapture and time-at-large of Bluegill.

WalleyePL

Summarized multiple mark-recapture data for YOY walleye.

WhitefishMB

Ages of Lake Whitefish from four lakes assigned from scales and fin-rays.

Herman

Lengths for Walleye, Yellow Perch, Black Crappie, and Black Bullheads from Lake Herman, SD.

HalibutPAC

Stock and recruitment data for Pacific Halibut, 1929-1991.

HerringBWE

Stock and recruitment data for Blackwater Estuary Herring, 1962-1997.

WhitefishTB

Stock and recruitment data for Lake Whitefish in Thunder Bay, Lake Superior, 1975-1988.

YPerchCB2

Stock and recruitment data for Yellow Perch in Chequamegon Bay, 1975-1986.

YPerchGB

Recruitment time-series for Yellow Perch in Green Bay, 1978-1992.

BSkateGB

Stock and recruitment data for Barndoor Skate from Georges Bank, 1966-2007.

BassFL

Catch-at-age for Suwanee and Largemouth Bass.

LakeTroutALTER

Biological data for Lake Trout from the Arctic LTER (AK).

LakeTroutEggs

Length and egg deposition of Lake Superior Lake Trout.

BlueCatfish

Ages and lengths of Blue Catfish.

Morwong3

Ages of Morwong assigned from otoliths by two readers.

Morwong4

Ages and lengths of Morwong.

PygmyWFBC

Biological data for Pygmy Whitefish from Dina Lake #1 (British Columbia), 2000 and 2001.

AHerringChile

Ages and lengths of Araucanian Herring from Chilean waters.

RBSmeltErie

Recruitment time-series for Rainbow Smelt in Lake Erie, 1977-1996.

AfricanRivers

Characteristics of a sample of West African rivers.

BrookTroutOnt

Summarized single mark-recapture data for Brook Trout across many years.

BrownTroutVC1

Single census mark-recapture data with lengths for Brown Trout from Valley Creek, MN.

RWhitefishIR

Ages and lengths of Round Whitefish.

BlueCrab

Catch and effort data for male Blue Crabs.

Bonito

Ages and lengths of Australian Bonito.

DarterMahon

Catch and effort data for Fantail Darter.

ChinookKR

Stock and recruitment data for Klamath River Chinook Salmon, 1979-2000.

DarterOnt

Ages and lengths of Channel Darters from two locations.

BrookTroutNC

Stock and recruitment data for Brook Trout from Ball Creek, NC, 1991-2004.

Cabezon

Ages, lengths, and maturity for female Cabezon from Oregon.

RedDrum

Ages and lengths for Red Drum from the Atlantic Coast.

FWDrumLE1

Ages and lengths of Lake Erie Freshwater Drum.

FWDrumLE2

Ages (subsample) and lengths (all fish) for Freshwater Drum from Lake Erie.

FHCatfish

Catch-at-age of Flathead Catfish from three southeastern rivers.

FHCatfishATL

Catch-at-age of Flathead Catfish from three Atlantic rivers.

Jonubi1

Ages and lengths of male Jonubi.

Casselman1990

Instantaneous growth rates for two calcified ageing structures.

RuffeSLRH92

Biological data for Ruffe captured from the St. Louis River in 1992.

CiscoTL

Lengths, weights, and sex of Cisco from Trout Lake, WI.

HerringISS

Stock and recruitment data for Icelandic summer spawning Herring, 1946-1996.

Deckeretal1999

Catches in removal events of Cutthroat Trout and Coho Salmon in Little Stawamus Creek (British Columbia, Canada) in 1997.

HumpbackWFCR

Capture histories (2 sample) of Humpback Whitefish.

KingCrabAK

Stock and recruitment data for Red King Crab in Alaska, 1960-2004.

LJCisco

Ages and lengths of Longjaw Cisco from two locations in Lake Michigan.

Pallid

Lengths and weights for Pallid Sturgeon from four locations in the Missouri River.

Pathfinder

Catch and effort for three Snapper species in a depletion experiment.

BullTroutRML1

Lengths and weights for Bull Trout from two Rocky Mountain lakes and two eras.

RuffeTL89

Lengths of Ruffe captured from the St. Louis River in July, 1989.

Jonubi2

Ages (subsample) and lengths (all fish) of Jonubi.

BullTroutRML2

Ages and lengths of Bull Trout from two Rocky Mountain lakes at two times.

SturgeonBL

Summarized multiple mark-recapture data for Lake Sturgeon.

Morwong1

Ages of Morwong assigned from otoliths by Reader A at two times.

CreekChub

Ages (subsample) and lengths (all fish) for Creek Chub.

.onAttach

Internal functions used in FSAdata.

CrappieARMS

Stock and recruitment data for Crappies from four reservoirs in Arkansas and Mississippi, USA.

Morwong2

Ages of Morwong assigned from otoliths by Reader B at two times.

SturgeonGB

Capture years and ages for Lake Sturgeon from Goulais Bay, Lake Superior, Ont.

EuroPerchTJ

Ages, lengths, and sexes of European Perch.

FSAdata

Data to support the FSA package.

PikeNYPartial2

Capture histories (4 samples) of a subset of Northern Pike from Buckthorn Marsh.

Lizardfish

Stock and recruitment data for Greater Lizardfish, 1955-1964.

RBTroutUNSP

Capture histories (2 sample) of Rainbow Trout.

VendaceLP

Stock and recruitment data for Vendace from Lake Puulavesi, 1982-1996.

VendaceLP2

Stock and recruitment data for Vendace from Lake Pyhajarvi.

RWhitefishAI

Ages and lengths of Round Whitefish.

Ghats

Species accumulation data for fish of the Western Ghats of India.

SculpinALTER

Biological data for Slimy Sculpin from the Arctic LTER (AK).

GreensCreekMine

Catches in removal events of Coho Salmon and Dolly Varden Char at various locations near the Greens Creek (AK) Mine site.

LobsterHI

Catch and effort data for Hawaiian Islands Slipper Lobster.

WalleyeErie2

Biological data for Walleye from Lake Erie, 2003-2014.

ShadCR

Ages of American Shad assigned from scales by three readers at two times.

WalleyeKS

Catch-at-age for Walleye from eight Kansas reservoirs.

SockeyeKL

Stock and recruitment data for Sockeye Salmon from Karluk Lake, AK, 1921-1948.

MulletBS

Ages of Red Mullet assigned from whole and broken-burnt otoliths.

WalleyeWad

Catches-at-age for male and female Walleye from Lake Winnebago, WI, 2010.

InchLake1

Lengths for all fish captured in Inch Lake, WI, in two years

PikeWindermere

Stock and recruitment data for Northern Pike from Lake Windermere, 1944-1981.

SockeyeSR

Stock and recruitment data for Skeena River Sockeye Salmon, 1940-1967.

WalleyeWyrlng

Annual catches of yearling Walleye in bottom trawls from Lake Winnebago, WI, 1986-2010.

InchLake2

Lengths and weights for fish captured in Inch Lake

SunfishIN

Summarized multiple mark-recapture data for Redear Sunfish.

SardineLK

Ages and lengths of larval Lake Tanganyika Sardine.

SardinesPacific

Stock and recruitment data for Pacific Sardines, 1935-1990.

LakeTroutGIS

Stock and recruitment data for Lake Trout from Gull Island Shoal, Lake Superior, 1964-1991.

MuskieSLR

Ages of Muskellunge assigned from scales and cleithra.

MuskieWI06MR

Summarized mark-recapture data for Muskellunge from many Wisconsin Lakes, 2006.

SpotVA2

Ages (subsample) and lengths (all fish) for Spot.

LakeTroutMI

Stock and recruitment data for Lake Trout in Lake Superior, 1971-1991.

LobsterPEI

Catch and effort data for Prince Edward Island Lobster.

SunfishLP

Catch-at-age for Bluegill and Redear Sunfish in Florida.

PSalmonAK

Stock and recruitment data for Alaskan Pink Salmon, 1960-1990.

Menhaden1

Catch-at-age for Gulf Menhaden, 1964-2004.

RBSmeltLM

Lengths for Rainbow Smelt from Lake Michigan, 1977.

RBTroutKenai

Length-at-marking and recapture and time-at-large of Rainbow Trout.

TroutBR

Ages and lengths of migratory Brown and Rainbow Trout.

SpottedSucker1

Ages and lengths of Spotted Sucker.

PikeHL

Capture histories (2 samples) of Northern Pike from Harding Lake.

TroutperchLM1

Ages, lengths, and sexes of Troutperch.

WalleyeEL

Stock and recruitment data for Walleye from Escanaba Lake, WI, 1958-1992.

PikeIL

Catch and effort data for Northern Pike from Island Lake, NB.

WalleyeErie

Recruitment time-series for Walleye in Lake Erie, 1959-1972.

SLampreyGL

Stock and recruitment data for Sea Lamprey in the Great Lakes, 1997-2007.

SalmonADP

Catches in removal events of salmon parr.

TroutperchLM2

Lengths for Troutperch from Lake Michigan, 1977.

RockBassLO1

Ages and lengths of Lake Ontario Rock Bass.

RockBassLO2

Ages (subsample) and lengths (all fish) for Rock Bass from Lake Ontario.

TroutperchLM3

Subsampled lengths of Troutperch from Lake Michigan, 1977.

SnapperHG1

Age (subsample) and length (all fish) of Snapper from two survey locations.

WhitefishGSL

Catch-at-age of Great Slave Lake Whitefish (commercial) by area.

SiscowetMI2004

Ages (subsample) and lengths (all fish) for male and female Siscowet Lake Trout captured at four locations in Michigan waters of Lake Superior.

SnapperHG2

Ages (subsample) and lengths (all fish) for Snapper.

WalleyePS

Ages of Walleye assigned from otoliths, scales, and spines.

WalleyeRL

Growth increment data for Red Lakes Walleye.

YPerchGL

Lengths and weights of Yellow Perch from Grafton Lake (ME) by year.

Snapper

Lengths for Snapper from Australia.

WhitefishLS

Landings and value of Lake Superior Lake Whitefish.

StripedBass5

Ages of Striped Bass assigned from otoliths by two readers.

StripedBass1

Ages of Striped Bass assigned from scales and otoliths.

StripedBass6

Ages of Striped Bass assigned from scales and otoliths.

YPerchRL

Recruitment time-series for Yellow Perch in Red Lakes, MN, 1942-1960.

WShrimpGA

Stock and recruitment data for White Shrimp off the coast of Georgia (USA), 1979-2000.

WalleyeConsumption

Consumption of prey by Walleye.

WalleyeML

Back-calculated lengths-at-age for Walleye from Lake Mille Lacs, 2000-2011.

StripedBass2

Ages and lengths of Atlantic Ocean Striped Bass.

WalleyeMN06a

Catch-at-age for Walleye.

TPrawnsEG

Stock and recruitment data for Exmouth Gulf Tiger Prawn, 1970-83.

YERockfish

Ages, lengths, and maturity for Yelloweye Rockfish.

TroutADP

Catches in removal events of trout.

WhiteGrunt1

Catch-at-age for White Grunt.

WhiteGrunt2

Ages, lengths, and sexes of White Grunt.

YPerchSB

Stock and recruitment data for Yellow Perch from South Bay, Lake Huron, 1950-1983.

YPerchSB1

Lengths for Yellow Perch from two locations in Saginaw Bay, Lake Michigan.

YPerchCB1

Catch-at-age for Yellow Perch from Chequamegon Bay, Lake Superior.

YPerchTL

Lengths and weights for Yellow Perch from Trout Lake, WI.

YTFlounder

Ages of Yellowtail Flounder assigned from scales and otoliths.