FSTpackage (version 0.1)

Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotation Scores

Description

Functions for sequencing studies allowing for multiple functional annotation scores. Score type tests and an efficient perturbation method are used for individual gene/large gene-set/genome wide analysis. Only summary statistics are needed.

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Version

Install

install.packages('FSTpackage')

Monthly Downloads

177

Version

0.1

License

GPL-3

Maintainer

Zihuai He

Last Published

June 27th, 2017

Functions in FSTpackage (0.1)

FST.GeneSet.test

Test the association between an quantitative/dichotomous outcome variable and a large gene-set by a score type test allowing for multiple functional annotation scores.

FST.SummaryStat.test

Using summary statistics to test the association between an quantitative/dichotomous outcome variable and a gene by a score type test allowing for multiple functional annotation scores.

FST.test

Test the association between an quantitative/dichotomous outcome variable and a gene by a score type test allowing for multiple functional annotation scores.

FST.example

Data example for FSTest (tests for genetic association allowing for multiple functional annotation scores)

FST.prelim

The preliminary data management for FST (functional score tests)