Learn R Programming

FamEvent (version 3.2)

summary.penmodel: Summary method for class penmodel

Description

Provides a summary of a fitted penetrance model.

Usage

# S3 method for penmodel
summary(object, correlation=FALSE, ...)

Value

Returns the object of class 'summary.penmodel', including the following summary values:

estimates

List of parameter estimates of transformed baseline parameters and regression coefficients, their standard errors, their robust standard errors if robust=TRUE was selected when fitting the penetrance model, \(t\)-statistics and corresponding two-sided \(p\)-values.

varcov

Variance-covariance matrix of the parameter estimates.

varcov.robust

Robust variance-covariance matrix of the parameter estimates if robust = TRUE was selected when fitting the penetrance model.

correlation

Correlation matrix obtained from the variance-covariance matrix.

correlation.robust

Correlation matrix obtained from the robust variance-covariance matrix if robust = TRUE was selected when fitting the penetrance model.

Arguments

object

An object class of 'penmodel', a fitted model by penmodel or penmodelEM functions.

correlation

Logical; if TRUE, returns the correlation matrix of the estimated parameters. Default is FALSE.

...

Further arguments passed to or from other methods.

Author

Yun-Hee Choi

See Also

penmodel, penmodelEM, print.penmodel, print.summary.penmodel plot.penmodel