Usage
get_itrdb(template = NULL, label = NULL, recon.years = NULL, calib.years = NULL, species = NULL, measurement.type = NULL, chronology.type = NULL, makeSpatial = F, raw.dir = "./RAW/ITRDB/", extraction.dir = "./EXTRACTIONS/ITRDB/", force.redo = FALSE)
Arguments
template
A Raster* or Spatial* object to serve
as a template for selecting chronologies. If missing,
all available global chronologies are returned.
label
A character string naming the study area.
recon.years
A numeric vector of years over which reconstructions are needed;
if missing, the union of all years in the available chronologies are given.
calib.years
A numeric vector of all required years---chronologies without these years will be discarded;
if missing, all available chronologies are given.
species
A character vector of 4-letter tree species identifiers;
if missing, all available chronologies are given.
measurement.type
A character vector of measurement type identifiers. Options include:
- "Total Ring Density"
- "Earlywood Width"
- "Earlywood Density"
- "Latewood Width"
- "Minimum Density"
- "Ring Width"
- "Latewood Density"
- "Maximum Density"
- "Latewood Percent"
if missing, all available chronologies are given.
chronology.type
A character vector of chronology type identifiers. Options include:
- "ARSTND"
- "Low Pass Filter"
- "Residual"
- "Standard"
- "Re-Whitened Residual"
- "Measurements Only"
if missing, all available chronologies are given.
makeSpatial
Should the metadata be presented as a SpatialPointsDataFrame? Defaults to FALSE.
raw.dir
A character string indicating where raw downloaded files should be put.
The directory will be created if missing. Defaults to "./RAW/ITRDB/".
extraction.dir
A character string indicating where the extracted and cropped ITRDB dataset should be put.
The directory will be created if missing. Defaults to "./EXTRACTIONS/ITRDB/".
force.redo
If an extraction already exists, should a new one be created? Defaults to FALSE.