A dataset containing expression informations of 12 genes in 11 celltypes. Original dataset from seurat-data package.
data(CBMC8K_example_data)A data frame with 132 rows and 12 variables
features.plot. Gene symbol
id. Cell type
RNA.pct.exp. RNA level : Percentage of cells expressing the gene in the cell type
RNA.avg.exp. RNA level : Average expression of the gene in the cell type
RNA.avg.exp.log2p1. RNA.avg.exp with log2(x+1) tranformation
RNA.avg.exp.scaled. RNA level : Scaled average expression
ADT.pct.exp.sup0. ADT level : Percentage of cells expressing the gene in the cell type (with expression >0)
ADT.pct.exp.sup.cutoff. ADT level : Percentage of cells expressing the gene in the cell type (with expression > background)
ADT.avg.exp. ADT level : Average expression of the gene in the cell type
ADT.avg.exp.log2p1. ADT.avg.exp with log2(x+1) tranformation
ADT.avg.exp.scaled. ADT level : Scaled average expression
canonical_marker. If the gene is a canonical marker of the cell type (yes or no)