A dataset containing expression informations of 39 genes in 8 celltypes. Original dataset from seurat-data package.
data(PBMC3K_example_data)A data frame with 312 rows and 13 variables
genes.plot. Gene symbol
id. Cell type
pct.exp. Percentage of cells expressing the gene in the cell type
pct.exp2. pct.exp with 2 decimal places
pct.exp100. pct.exp.2 x 100
avg.exp. Average expression of the gene in the cell type
avg.exp.scale. Scaled average expression
abs_avg_exp_scale Absolute value of avg.exp.scale
avg_logFC. log fold-chage of the average expression of the gene between the cell type and the others
avg_logFC2. avg_logFC with 2 decimal places
p_val_adj. Adjusted p-value based on bonferroni correction
p_val_adj2. p_val_adj with 2 decimal places
pval_symb. Adjusted p-value classification ("<1e-100" or "<1e-50" or "<1e-10" or "<0.01" or ">0.01")