Shrinkage of the covariance matrix according to Schäfer and Strimmer (2005).
shrink_estim(x, mse = TRUE)A shrunk covariance matrix.
A numeric matrix containing the in-sample residuals.
If TRUE (default), the residuals used to compute the covariance
matrix are not mean-corrected.
Schäfer, J.L. and Strimmer, K. (2005), A shrinkage approach to large-scale covariance matrix estimation and implications for functional genomics, Statistical Applications in Genetics and Molecular Biology, 4, 1
Utilities:
FoReco2matrix(),
aggts(),
balance_hierarchy(),
commat(),
csprojmat(),
cstools(),
ctprojmat(),
cttools(),
df2aggmat(),
lcmat(),
recoinfo(),
res2matrix(),
set_bounds(),
shrink_oasd(),
teprojmat(),
tetools(),
unbalance_hierarchy()