big.peaks.col

A scalar value deciding when peaks will be ignored

This function find all peaks by taking the first derivative based on 'rle' function. Is used in different Fragma functions.

Performs fragment analysis using genetic data coming from capillary electrophoresis machines. These are files with FSA extension which stands for FASTA-type file and contains DNA fragment intensities read by machinery. In addition to visualization, it performs automatic scoring of SSRs (Sample Sequence Repeats; a type of genetic marker very common across the genome) and other type of PCR markers (standing for Polymerase Chain Reaction) in biparental populations such as F1, F2, BC (backcross), and diversity panels (collection of genetic diversity).

big.peaks.col: Peak search by first derivatives

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