Fragman (version 1.0.1)

saturate: Checking and correcting saturated peaks

Description

This function takes a vector of intensities and looks for peaks above 8000 RFUs and correct for possible splits at the top of the peaks by inverting the vally between splitted peaks and correcting the peak.

Usage

saturate(y)

Arguments

y

a vector containing the DNA intensities for the capillary electrophoresis.

Value

• If arguments are correctly specified the function returns: [object Object]

Details

No major details.

References

Robert J. Henry. 2013. Molecular Markers in Plants. Wiley-Blackwell. ISBN 978-0-470-95951-0.

Ben Hui Liu. 1998. Statistical Genomics. CRC Press LLC. ISBN 0-8493-3166-8.

Examples

data(my.plants)
y <- my.plants[[1]][,3]
layout(matrix(1:2,2,1))
plot(y, type="l", xlim=c(2750,2850))
y2 <- saturate(y=y)
plot(y2, type="l", xlim=c(2750,2850))