panel.smooth.r

col.smooth

span

iter


To generate a base pair x-y plot, a part of <code><a rd-options="" href="/link/corplot?package=GCAI.bias&version=1.0" data-mini-rdoc="GCAI.bias::corplot">corplot</a></code>


visualization

Many inherited biases and effects exists in RNA-seq due to both biological and technical effects. We observed the biological variance of testing target transcripts can influence the yield of sequencing reads, which might indicate a resource competition existing in RNA-seq. We developed this package to capture the bias depending on local sequence and perform the correction of this type of bias by borrowing information from spike-in measurement.

Guoshuai Cai

GCAI.bias

Guided Correction Approach for Inherited bias (GCAI.bias)

panel.smooth.r function


Scatter Plot Generation


panel.smooth.r: Scatter Plot Generation

Description

Usage

Arguments

References

See Also