GCAI.bias (version 1.0)

test.dat.seq: Testing Sequence Index Dataset

Description

An example, a data frame of sequence index of testing samples

Usage

data(test.dat.seq)

Format

A data frame with 1527 observations on the following 85 variables.

gene

a factor with levels ERCC-00002 ERCC-00003 ERCC-00007 ERCC-00009 ERCC-00012 ERCC-00013 ERCC-00014 ERCC-00016 ERCC-00017 ERCC-00018 ERCC-00019 ERCC-00022 ERCC-00023 ERCC-00024 ERCC-00025 ERCC-00028 ERCC-00031 ERCC-00033 ERCC-00034 ERCC-00035 ERCC-00039 ERCC-00040 ERCC-00041 ERCC-00042 ERCC-00044 ERCC-00048 ERCC-00054 ERCC-00057 ERCC-00058 ERCC-00059 ERCC-00061 ERCC-00079 ERCC-00084 ERCC-00170

pos

a numeric vector

code_strand

a factor with levels +

seq_strand

a factor with levels S

X1

a numeric vector

X2

a numeric vector

X3

a numeric vector

X4

a numeric vector

X5

a numeric vector

X6

a numeric vector

X7

a numeric vector

X8

a numeric vector

X9

a numeric vector

X10

a numeric vector

X11

a numeric vector

X12

a numeric vector

X13

a numeric vector

X14

a numeric vector

X15

a numeric vector

X16

a numeric vector

X17

a numeric vector

X18

a numeric vector

X19

a numeric vector

X20

a numeric vector

X21

a numeric vector

X22

a numeric vector

X23

a numeric vector

X24

a numeric vector

X25

a numeric vector

X26

a numeric vector

X27

a numeric vector

X28

a numeric vector

X29

a numeric vector

X30

a numeric vector

X31

a numeric vector

X32

a numeric vector

X33

a numeric vector

X34

a numeric vector

X35

a numeric vector

X36

a numeric vector

X37

a numeric vector

X38

a numeric vector

X39

a numeric vector

X40

a numeric vector

X41

a numeric vector

X42

a numeric vector

X43

a numeric vector

X44

a numeric vector

X45

a numeric vector

X46

a numeric vector

X47

a numeric vector

X48

a numeric vector

X49

a numeric vector

X50

a numeric vector

X51

a numeric vector

X52

a numeric vector

X53

a numeric vector

X54

a numeric vector

X55

a numeric vector

X56

a numeric vector

X57

a numeric vector

X58

a numeric vector

X59

a numeric vector

X60

a numeric vector

X61

a numeric vector

X62

a numeric vector

X63

a numeric vector

X64

a numeric vector

X65

a numeric vector

X66

a numeric vector

X67

a numeric vector

X68

a numeric vector

X69

a numeric vector

X70

a numeric vector

X71

a numeric vector

X72

a numeric vector

X73

a numeric vector

X74

a numeric vector

X75

a numeric vector

X76

a numeric vector

X77

a numeric vector

X78

a numeric vector

X79

a numeric vector

X80

a numeric vector

X81

a numeric vector

References

Cai G, RNA-SEQUENCING APPLICATIONS: GENE EXPRESSION QUANTIFICATION AND METHYLATOR PHENOTYPE IDENTIFICATION, Ph.D. Thesis, 2013

Examples

data(test.dat.seq)