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GGBase (version 3.34.0)

GGBase infrastructure for genetics of gene expression package GGtools

Description

infrastructure

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Version

Version

3.34.0

License

Artistic-2.0

Maintainer

Vince Carey

Last Published

February 15th, 2017

Functions in GGBase (3.34.0)

smlSet-class

Class "smlSet"
rsid-class

Class "rsid"
MAFfilter

Filter genotype contents of an smlSet according to certain SNP allele frequency features.
plot_EvG

display the association between expression values and genotypes in an smlSet instance
externalize

create a package with a decomposed smlSet instance from a unified smlSet instance, to reduce memory footprints
make_smlSet

construct an smlSet instance from existing resources
clipPCs

transformations of expression data in smlSet instances