strMultPop

 serialization of a table from Stranger's multipopulation eQTL report 

datasets

software and data for analyses in genetics of gene expression
and/or DNA methylation

Vince Carey

GGtools

software and data for analyses in genetics of gene expression

strMultPop function

A data frame with 39649 observations on the following 12 variables.
  <dl>
    <dt><code>rsid</code></dt><dd>a factor with levels rs...</dd> <dt><code>genesym</code></dt><dd>a factor with levels <code>37865</code> <code>39692</code> <code>ABC1</code> <code>ABCD2</code> <code>ABHD4</code> <code>ACAS2</code> ...</dd> <dt><code>illv1pid</code></dt><dd>a factor with levels <code>GI_10047105-S</code> <code>GI_10092611-A</code> <code>GI_10190705-S</code> <code>GI_10567821-S</code> <code>GI_10835118-S</code> <code>GI_10835186-S</code>  ...</dd> <dt><code>snpChr</code></dt><dd>a numeric vector</dd> <dt><code>snpCoordB35</code></dt><dd>a numeric vector</dd> <dt><code>probeMidCoorB35</code></dt><dd>a numeric vector</dd> <dt><code>snp2probe</code></dt><dd>a numeric vector</dd> <dt><code>minuslog10p</code></dt><dd>a numeric vector</dd> <dt><code>adjR2</code></dt><dd>a numeric vector</dd> <dt><code>assocGrad</code></dt><dd>a numeric vector</dd> <dt><code>permThresh</code></dt><dd>a numeric vector</dd> <dt><code>popSet</code></dt><dd>a factor with levels <code>CEU-CHB-JPT</code> <code>CEU-CHB-JPT-YRI</code> <code>CHB-JPT</code></dd> </dl> 

Format

Source

serialization of a table from Stranger's multipopulation eQTL report

strMultPop: serialization of a table from Stranger's multipopulation eQTL report

Description

Usage

Arguments

Format

Source

Details

References

Examples