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GLAD (version 2.36.0)
Gain and Loss Analysis of DNA
Description
Analysis of array CGH data : detection of breakpoints in genomic profiles and assignment of a status (gain, normal or loss) to each chromosomal regions identified.
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Version
Version
2.36.0
2.34.0
2.32.0
2.30.0
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Version
2.36.0
License
GPL-2
Maintainer
Philippe Hupe
Last Published
December 19th, 2011
Functions in GLAD (2.36.0)
Search functions
cytoband
Cytogenetic banding
arrayPersp
Perspective image of microarray spots statistic
ColorBar
Calibration bar for color images
myPalette
Microarray color palette
ChrNumeric
Convert chromosome into numeric values
tkdaglad
Graphical interface for GLAD package
glad
Analysis of array CGH data
array
Bladder cancer CGH data
kernelpen
Kernelpen function
GLAD-internal
GLAD-internal
profileCGH
Objects of Class profileCGH and profileChr
arrayPlot
Spatial image of microarray spots statistic
as.data.frame.profileCGH
profileCGH consercion
daglad
Analysis of array CGH data
snijders
Public CGH data of Snijders
arrayCGH
Object of Class arrayCGH
plotProfile
Plot genomic profile and cytogenetic banding
veltman
Public CGH data of Veltman
hclustglad
Hierarchical Clustering
as.profileCGH
Create an object of class profileCGH