This simulated data list is for demonstration.
A list containing
The known confounders matrix which is adjusted in all mediation tests. Each row is a confounder, each column is a sample.
The pool of candidate confounding variables from which potential confounders are adaptively selected to adjust for each mediation test. Each row is a covariate, each column is a sample.
The gene expression matrix. Each row is for one gene, each column is a sample.
The cis-eQTL genotype matrix. Each row is an eQTL, each column is a sample.
The matrix of selected trios indexes (row numbers) for mediation tests. Each row consists of the index (i.e., row number) of the eQTLs in snp.dat.cis,
the index of cis-gene transcript in exp.dat, and the index of trans-gene transcript in exp.dat. The dimension is the number of trios by three.