GO2DecCC

The GO2DecCC function provides a simple way to represent the cellular component (CC) GO-terms.
 The function returns the descendant child nodes of a GO-term. In other words we begin from an
 ancestor term and find it's descendant child terms.

It provides an effective, efficient, and fast way to explore the Gene Ontology (GO).
Given a set of genes, the package contains functions to assess the GO and obtain the
terms associated with the genes and the levels of the GO terms. The package provides
functions for the three different GO ontology. We discussed the methods explicitly in
the following article <doi:10.1038/s41598-020-73326-3>.

Kalifa Manjang

GOxploreR

Structural Exploration of the Gene Ontology (GO) Knowledge Base

Frank Emmert-Streib

Shailesh Tripathi

Olli Yli-Harja

Matthias Dehmer

GO2DecCC function

<dl><dt>goterm</dt>
<dd>A string object of CC GO-terms</dd></dl>

Arguments

GO cellular component (CC) descendant GO-terms as an Edgelist — GO2DecCC

<dl>

<dt>goterm</dt>
<dd>A string object of CC GO-terms</dd>

</dl>

GO2DecCC: GO cellular component (CC) descendant GO-terms as an Edgelist

Description

Usage

Value

Arguments

Examples