GOTermBP2ChildLevel

This function retrieves a GO BP term children's level i.e. for a GO-term it's children level are derived.

It provides an effective, efficient, and fast way to explore the Gene Ontology (GO).
Given a set of genes, the package contains functions to assess the GO and obtain the
terms associated with the genes and the levels of the GO terms. The package provides
functions for the three different GO ontology. We discussed the methods explicitly in
the following article <doi:10.1038/s41598-020-73326-3>.

Kalifa Manjang

GOxploreR

Structural Exploration of the Gene Ontology (GO) Knowledge Base

Frank Emmert-Streib

Shailesh Tripathi

Olli Yli-Harja

Matthias Dehmer

GOTermBP2ChildLevel function

<dl><dt>goterm</dt>
<dd>A character string of a valid gene ontology id e.g "GO:0097278"</dd></dl>

Arguments

Get the level of a biological process (BP) GO term's children — GOTermBP2ChildLevel

<dl>

<dt>goterm</dt>
<dd>A character string of a valid gene ontology id e.g "GO:0097278"</dd>

</dl>

GOTermBP2ChildLevel: Get the level of a biological process (BP) GO term's children

Description

Usage

Value

Arguments

Examples