GOTermCCOnLevel

Get the level of a GO cellular component (CC) term based on the directed acyclic graph (DAG)

It provides an effective, efficient, and fast way to explore the Gene Ontology (GO).
Given a set of genes, the package contains functions to assess the GO and obtain the
terms associated with the genes and the levels of the GO terms. The package provides
functions for the three different GO ontology. We discussed the methods explicitly in
the following article <doi:10.1038/s41598-020-73326-3>.

Kalifa Manjang

GOxploreR

Structural Exploration of the Gene Ontology (GO) Knowledge Base

Frank Emmert-Streib

Shailesh Tripathi

Olli Yli-Harja

Matthias Dehmer

GOTermCCOnLevel function

<dl><dt>goterm</dt>
<dd>An object of class character. A character string of GO cellular component (CC) terms.
The object can be a GO-term or a vector of GO-terms</dd></dl>

Arguments

GO cellular component (CC) terms level getter — GOTermCCOnLevel

<dl>

<dt>goterm</dt>
<dd>An object of class character. A character string of GO cellular component (CC) terms.
The object can be a GO-term or a vector of GO-terms</dd>

</dl>

GOTermCCOnLevel: GO cellular component (CC) terms level getter

Description

Usage

Value

Arguments

Examples