GPrank (version 0.1.4)

bitseq_rnaSeqData: Obtaining data in the format of example RNAseqDATA by using BitSeq output files

Description

Function for obtaining the means and standard deviations at the available time points.

Usage

bitseq_rnaSeqData(t, trFileName)

Arguments

t

Vector which contains the input values, i.e., time points. The file names for the corresponding time point is specified as the names of this vector.

trFileName

Name of the transcriptome file.

Value

List of GP data within the right structure.

Examples

# NOT RUN {
# t=log(c(0,5,10,20,40,80,160,320,640,1280)+5)
# names(t)=c("t0000.rpkm","t0005.rpkm","t0010.rpkm","t0020.rpkm","t0040.rpkm",
# "t0080.rpkm","t0160.rpkm","t0320.rpkm","t0640.rpkm","t1280.rpkm")
# trFileName="example_tr"
# bitseq_rnaSeqData(t,trFileName)

# }