clin_data

This dataset contains clinical and demographic information for 265 newly diagnosed T-ALL patients.
The data originates from Liu, Yu, et al. (2017) and includes variables relevant to patient characteristics
and clinical outcomes.

datasets

Improved version of 'GRIN' software that streamlines its use in practice to analyze genomic lesion data, accelerate its computing, and expand its analysis capabilities to answer additional scientific questions including a rigorous evaluation of the association of genomic lesions with RNA expression. Pounds, Stan, et al. (2013) <DOI:10.1093/bioinformatics/btt372>.

Abdelrahman Elsayed

GRIN2

Genomic Random Interval (GRIN)

Xueyuan Cao

Lakshmi Anuhya patibandla

Stanley Pounds

clin_data function

A data frame with 265 rows and 11 columns:<dl>
<dt>ID</dt>
<dd>Unique patient identifier</dd><dt>Sex</dt>
<dd>Patient gender</dd><dt>Race</dt>
<dd>Patient race</dd><dt>Age_Days</dt>
<dd>Age at diagnosis, in days</dd><dt>WBC</dt>
<dd>White Blood Cell count at diagnosis</dd><dt>MRD29</dt>
<dd>Minimal Residual Disease percentage at day 29 post-treatment</dd><dt>MRD.binary</dt>
<dd>Categorical MRD status (0 = MRD &lt;= 0.1, 1 = MRD &gt; 0.1)</dd><dt>os.time</dt>
<dd>Overall survival time in years (from diagnosis to last follow-up or death)</dd><dt>os.censor</dt>
<dd>Overall survival status (0 = alive at last follow-up, 1 = deceased)</dd><dt>efs.time</dt>
<dd>Event-free survival time in years</dd><dt>efs.censor</dt>
<dd>Event status for event-free survival (0 = censored, 1 = event occurred)</dd>
</dl>

Format

Example Clinical Dataset for T-cell Acute Lymphoblastic Leukemia (T-ALL) — clin_data

A data frame with 265 rows and 11 columns:<dl>
<dt>ID</dt>
<dd>Unique patient identifier</dd>

<dt>Sex</dt>
<dd>Patient gender</dd>

<dt>Race</dt>
<dd>Patient race</dd>

<dt>Age_Days</dt>
<dd>Age at diagnosis, in days</dd>

<dt>WBC</dt>
<dd>White Blood Cell count at diagnosis</dd>

<dt>MRD29</dt>
<dd>Minimal Residual Disease percentage at day 29 post-treatment</dd>

<dt>MRD.binary</dt>
<dd>Categorical MRD status (0 = MRD &lt;= 0.1, 1 = MRD &gt; 0.1)</dd>

<dt>os.time</dt>
<dd>Overall survival time in years (from diagnosis to last follow-up or death)</dd>

<dt>os.censor</dt>
<dd>Overall survival status (0 = alive at last follow-up, 1 = deceased)</dd>

<dt>efs.time</dt>
<dd>Event-free survival time in years</dd>

<dt>efs.censor</dt>
<dd>Event status for event-free survival (0 = censored, 1 = event occurred)</dd>


</dl>

clin_data: Example Clinical Dataset for T-cell Acute Lymphoblastic Leukemia (T-ALL)

Description

Usage

Arguments

Format