expr_data

<p>Log2-normalized gene expression data for 417 genes across 265 newly diagnosed T-cell Acute Lymphoblastic Leukemia (T-ALL) patients, as reported by Liu, Yu, et al. (2017).</p>

datasets

Improved version of 'GRIN' software that streamlines its use in practice to analyze genomic lesion data, accelerate its computing, and expand its analysis capabilities to answer additional scientific questions including a rigorous evaluation of the association of genomic lesions with RNA expression. Pounds, Stan, et al. (2013) <DOI:10.1093/bioinformatics/btt372>.

Abdelrahman Elsayed

GRIN2

Genomic Random Interval (GRIN)

Xueyuan Cao

Lakshmi Anuhya patibandla

Stanley Pounds

expr_data function


<div class="section" id="expr-data">
<h3><code>expr_data</code></h3><p></p><p>
</p><p>A data frame with 417 rows and 265 columns:</p><dl>
<dt>gene</dt>
<dd><p>Ensembl gene IDs of the 417 selected genes included in the dataset.</p></dd><p></p><p><dt>...</dt>
<dd><p>Each remaining column represents a T-ALL patient with log2-normalized expression values.</p></dd></p><p>
</p></dl><p></p><p></p></div>


Format

Example T-ALL Gene Expression Dataset — expr_data


<div class='section' id='expr-data'>
<h3><code>expr_data</code></h3>


<p>A data frame with 417 rows and 265 columns:</p><dl>
<dt>gene</dt>
<dd><p>Ensembl gene IDs of the 417 selected genes included in the dataset.</p></dd>

<dt>...</dt>
<dd><p>Each remaining column represents a T-ALL patient with log2-normalized expression values.</p></dd>


</dl>

</div>


expr_data: Example T-ALL Gene Expression Dataset

Description

Usage

Arguments

Format

`expr_data`