pathways

<p>A dataset listing genes annotated to various biological pathways, as reported in Liu, Yu, et al. (2017).</p>

datasets

Improved version of 'GRIN' software that streamlines its use in practice to analyze genomic lesion data, accelerate its computing, and expand its analysis capabilities to answer additional scientific questions including a rigorous evaluation of the association of genomic lesions with RNA expression. Pounds, Stan, et al. (2013) <DOI:10.1093/bioinformatics/btt372>.

Abdelrahman Elsayed

GRIN2

Genomic Random Interval (GRIN)

Xueyuan Cao

Lakshmi Anuhya patibandla

Stanley Pounds

pathways function


<div class="section" id="pathways">
<h3><code>pathways</code></h3><p></p><p>
</p><p>A data frame with 121 rows and 3 columns:</p><dl>
<dt>gene.name</dt>
<dd><p>Gene symbol.</p></dd><p></p><p><dt>ensembl.id</dt>
<dd><p>Ensembl gene ID.</p></dd></p><p><dt>pathway</dt>
<dd><p>Biological pathway to which the gene is annotated.</p></dd></p><p>
</p></dl><p></p><p></p></div>


Format

Genes Annotated to Biological Pathways — pathways


<div class='section' id='pathways'>
<h3><code>pathways</code></h3>


<p>A data frame with 121 rows and 3 columns:</p><dl>
<dt>gene.name</dt>
<dd><p>Gene symbol.</p></dd>

<dt>ensembl.id</dt>
<dd><p>Ensembl gene ID.</p></dd>

<dt>pathway</dt>
<dd><p>Biological pathway to which the gene is annotated.</p></dd>


</dl>

</div>


pathways: Genes Annotated to Biological Pathways

Description

Usage

Arguments

Format

`pathways`