Internal samr functions
# S3 method for GSA.func
print(x, ...)
# S3 method for GSA
print(x, ...)
# S3 method for GSA.genesets
summary(object, ...)
varr(x, meanx=NULL)
coxvar(x, y, ic, offset = rep(0., length(y)), coxstuff.obj = NULL)
coxstuff(x, y, ic, offset = rep(0., length(y)))
est.s0(tt,sd,s0.perc=seq(0,1, by=.05))
GSA.xl.genescores(GSA.listsets.obj, genesets, GSA.obj, genenames)
GSA.xl.plot(GSA.obj, fac=.10, FDRcut=1)
GSA.xl.summary.genesets(GSA.genesets.obj)
GSA.xl.correlate(GSA.genesets.obj, genenames)
ttest.func(x, y, s0 = 0, sd=NULL)
cox.func(x, y, censoring.status, s0 = 0)
multiclass.func(x, y, s0 = 0)
quantitative.func(x, y, s0 = 0)These are not to be called by the user.