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GSEAlm (version 1.32.0)

Linear Model Toolset for Gene Set Enrichment Analysis

Description

Models and methods for fitting linear models to gene expression data, together with tools for computing and using various regression diagnostics.

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Version

Version

1.32.0

License

Artistic-2.0

Maintainer

Assaf Oron

Last Published

February 15th, 2017

Functions in GSEAlm (1.32.0)

lmPerGene

Fit linear model for each gene
gsealmPerm

Nonparametric inference for linear models in Gene-Set-Enrichment Analysis (GSEA)
resplot

Simple Graphical Summaries for Gene Set Enrichment Analysis (GSEA)
GSNormalize

Aggregating and calculating expression statistics by Gene Set
getResidPerGene

Row-by-Row Linear-Model Residuals for Gene Expression (or similar) Data Structures
dfbetasPerGene

Linear-Model Deletion Diagnostics for Gene Expression (or similar) Data Structures