polyaeggenberger

logLikguilds

localComm

getpx

local_esf

evaluateLogLik

conditional.LogLik

calc_sum_kda

calc_conditional

evaluate_cond_lik

calcKDA

pm_sad

pm_sadaux

draw_local_cond

draw_local

sort_aux

generate.ZSM

octave_index

preston_sort

internal

GUILDS-internal

A collection of sampling formulas for the unified neutral
model of biogeography and biodiversity. Alongside the sampling
formulas, it includes methods to perform maximum likelihood
optimization of the sampling formulas, methods to generate data given
the neutral model, and methods to estimate the expected species
abundance distribution. Sampling formulas included in the GUILDS
package are the Etienne Sampling Formula (Etienne 2005), the guild
sampling formula, where guilds are assumed to differ in dispersal
ability (Janzen et al. 2015), and the guilds sampling formula
conditioned on guild size (Janzen et al. 2015).

Thijs Janzen

GUILDS

Implementation of Sampling Formulas for the Unified Neutral
Model of Biodiversity and Biogeography, with or without Guild
Structure

GUILDS-internal: Internal Guilds functions

Description

Arguments

Details