function for making genome-wide p-value plot
function to efficiently test associations between a continuous trait and a batch of imputed SNPs in families using
Linear Mixed Effects model
lmepack.int.batch.imputed
function to test gene-environment or gene-gen interaction and associations between a continuous trait and a batch of imputed SNPs in families using
Linear Mixed Effects model
geepack.quant.batch.imputed
function to test associations between a continuous trait and a batch of imputed SNPs in families using
Generalized Estimation Equation model
Genome-wide association/interaction analysis and rare variant analysis with family data
function to make Qantile-Qantile (QQ) plot for p-values
function for testing association between a dichotomous trait and a genotyped SNP in family data using Generalized Estimation Equation model
function for testing association between a dichotomous trait and a genotyped SNP in family data using Generalized Linear Mixed Effects model
geepack.lgst.int.batch.imputed
function to test gene-environment or gene-gene interactions between a dichotomous trait and a batch of imputed SNPs in families using
Generalized Estimation Equation model
geepack.quant.int.batch.imputed
function to test gene-environment or gene-gene interactions between a continuous trait and a batch of imputed SNPs in families using
Generalized Estimation Equation model
function to test genetic association between a dichotomous trait and a batch of genotyped SNPs in families using
Generalized Linear Mixed Effects model
function to test genetic associations between a continuous trait and a batch of genotyped SNPs in families using
Linear Mixed Effects model
function to test associations between a continuous trait and a batch of imputed SNPs in families using
Linear Mixed Effects model
function to test gene-environment or gene-gene interactions for a continuous trait and a batch of genotyped SNPs in families using
Generalized Estimation Equation model
function for testing gene-environment or gene-gene interaction between a dichotomous trait and a genotyped SNP in family data using Generalized Estimation Equation model
function for testing association between a dichotomous trait and an imputed SNP in family data using Generalized Estimation Equation model
geepack.lgst.batch.imputed
function to test genetic associations between a dichotomous trait and a batch of imputed SNPs in families using
Generalized Estimation Equation model
function to test gene-environment or gene-gene interactions for a continuous trait and a batch of genotyped SNPs in families using
Linear Mixed Effects model
function for testing gene-environment or gene-gene interaction between a dichotomous trait and an imputed SNP in family data using Generalized Estimation Equation model
function to test genetic associations between a dichotomous trait and a batch of genotyped SNPs in families using
Generalized Estimation Equation model
function to test gene-environment or gene-gene interactions between a dichotomous trait and a batch of genotyped SNPs in families using
Generalized Estimation Equation model
function to test genetic associations between a continuous trait and a batch of genotyped SNPs in families using
Generalized Estimation Equation model
function to generate scripts for genome-wide association/interaction analysis