get.headerTranslation

This template file is used to translate a dataset`s column names (the header) into the standard names used by GWASinspector.
The file contains a two-column table, with the left column containing the standard column-names and the right the alternatives.
Both the standard and alternative columns must be fully capitalized. This is a text file which includes most common variable/header names and can be edited according to user specifications.
The default filename is alt_headers.txt.

When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.

Alireza Ani

GWASinspector

Comprehensive and Easy to Use Quality Control of GWAS Results

Peter J. van der Most

Ahmad Vaez

Ilja M. Nolte

get.headerTranslation function

<dl><dt>dir.path</dt>
<dd>Path to the folder for saving a header-translation table file.</dd></dl>

Arguments

Copies the template header translation table to the local machine — get.headerTranslation

<dl>

<dt>dir.path</dt>
<dd>Path to the folder for saving a header-translation table file.</dd>

</dl>

get.headerTranslation: Copies the template header translation table to the local machine

Description

Usage

Value

Arguments