get_config

This templates should be edited and then used for setting up and running the QC pipeline.
Default filename is config.ini.

When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.

Alireza Ani

GWASinspector

Comprehensive and Easy to Use Quality Control of GWAS Results

Peter J. van der Most

Ahmad Vaez

Ilja M. Nolte

get_config function

<dl><dt>dir.path</dt>
<dd>Path to the folder for saving a sample configuration file.</dd></dl>

Arguments

Copies the template configuration file to the local machine — get_config

<dl>

<dt>dir.path</dt>
<dd>Path to the folder for saving a sample configuration file.</dd>

</dl>

get_config: Copies the template configuration file to the local machine

Description

Usage

Value

Arguments