system_check

<p>Checks if required and optional packages are installed on the system.
Although the optional packages do not contribute to the QC itself, having them available
will allow for Excel and HTML formatted log files, which are easier to read and interpret.</p>

When evaluating the results of a genome-wide association study (GWAS), it is important to perform a quality control to ensure that the results are valid, complete, correctly formatted, and, in case of meta-analysis, consistent with other studies that have applied the same analysis. This package was developed to facilitate and streamline this process and provide the user with a comprehensive report.

Alireza Ani

GWASinspector

Comprehensive and Easy to Use Quality Control of GWAS Results

Peter J. van der Most

Ahmad Vaez

Ilja M. Nolte

system_check function

Checks which required and optional packages are available — system_check

Checks which required and optional packages are available

system_check: Checks which required and optional packages are available

Description

Usage

Arguments

Value