GaMaBioMD (version 0.2.0)

expand_accession_ranges: This function expands accession number ranges, creating a data frame with sample and accession numbers.

Description

This function expands accession number ranges, creating a data frame with sample and accession numbers.

Usage

expand_accession_ranges(accession_ranges)

Value

A data frame with columns 'sample' and 'accession'.

Arguments

accession_ranges

A named list where each element represents an accession range. The names of the list elements should correspond to sample names.

Examples

# Example of defining accession number ranges.
accession_ranges <- list(
  SRU1 = "AJ240966 to AJ240970",
  STU2 = "AB015240 to AB015250",
  WRU8 = c("AF245628", "AF353208 to AF353210"),
  WPU13 = "L11934 to L11940",
  INU20 = c("AF277467 to AF277470", "AF333080 to AF333086")
)

# Use the function to expand accession ranges
sam_acc <- expand_accession_ranges(accession_ranges)
print(sam_acc)