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GapAnalysis (version 1.0.2)

Conservation Indicators using Spatial Information

Description

Supports the assessment of the degree of conservation of taxa in conservation systems, both in ex situ [in genebanks, botanical gardens, and other repositories] and in situ [in protected natural areas]. Methods are described in Carver et al. [2021] , building on Khoury et al. [2020] , Khoury et al. [2019] , Khoury et al. [2019] , Castaneda-Alvarez et al. [2016] , and Ramirez-Villegas et al. [2010] .

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Install

install.packages('GapAnalysis')

Monthly Downloads

45

Version

1.0.2

License

GPL-3

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Maintainer

Julian Ramirez-Villegas

Last Published

June 14th, 2021

Functions in GapAnalysis (1.0.2)

FCSex

Final conservation score ex situ
GRSex

Geographical representativeness score ex situ
ERSin

Ecological representativeness score in situ
FCSc_mean

Combining ex situ and in situ gap analyses
FCSin

Final conservation score in situ
GRSin

Geographical representativeness score in situ
ERSex

Ecological representativeness score ex situ
GapAnalysis-package

GapAnalysis: An R package to calculate conservation indicators using spatial information
SRSin

Sampling representativeness score in situ
Gbuffer

@title Geodesic buffer around points (long, lat) using metric radius EXTRACTED FROM GEOBUFFER R PACKAGE
OccurrenceCounts

Generating counts dataframe for taxa
ParamTest

Input Parameter Test
indicator

Conservation indicator across taxa based on gap analysis results
ecoregions

Ecoregions shapefile
GetDatasets

Preparing datasets to run GapAnalysis functions
SummaryHTML

Creating a summary HTML document for each taxon
CucurbitaRasters

Cucurbita species distribution models dataset
SRSex

Sampling representativeness score ex situ
CucurbitaData

Cucurbita occurrences dataset
ProtectedAreas

Protected areas dataset in raster format