plot_p

This function plots a phylogenetic tree with nodes sized and colored according to the proportions of each clone.

Simulating, visualizing and comparing tumor clonal data by using simple commands. This aims at providing a tool to help researchers to easily simulate tumor data and analyze the results of their approaches for studying the composition and the evolutionary history of tumors.

Aitor Sánchez-Ferrera

GeRnika

Simulation, Visualization and Comparison of Tumor Evolution Data

Maitena Tellaetxe-Abete

Borja Calvo

plot_p function

<dl><dt>phylotree</dt>
<dd>An object of the <code>Phylotree</code> class representing the phylogenetic tree to be plotted.</dd>
<dt>proportions</dt>
<dd>A numeric vector representing the proportions of each clone in the phylogenetic tree. The length of this vector should be equal to the number of clones in the tree.</dd></dl>

Arguments

Plot a phylogenetic tree with proportional node sizes and colors. — plot_p

<dl>

<dt>phylotree</dt>
<dd>An object of the <code>Phylotree</code> class representing the phylogenetic tree to be plotted.</dd>


<dt>proportions</dt>
<dd>A numeric vector representing the proportions of each clone in the phylogenetic tree. The length of this vector should be equal to the number of clones in the tree.</dd>

</dl>

plot_p: Plot a phylogenetic tree with proportional node sizes and colors.

Description

Usage

Value

Arguments