snp.mx-class

[,snp.mx,ANY,ANY,ANY-method

coerce,snp.mx,numeric-method

coerce,snp.mx,character-method

show,snp.mx-method

summary,snp.mx-method

This low-level class contains objects holding large 
arrays of single nucleotide polymorphism (SNP) genotypes

classes

a package for genome-wide association analysis between
quantitative or binary traits and single-nucleotide
polymorphisms (SNPs).

Yurii Aulchenko

GenABEL

genome-wide SNP association analysis

snp.mx-class function

<dl>
    <dt><code>.Data</code>:</dt><dd>object used to store genotypes</dd> </dl> 

Slots

<dl>
    <dt>[</dt><dd><code>signature(x = "snp.mx", i = "ANY", j = "ANY", drop = "ANY")</code>: subset
      operations. x[i,j] will select people listed in i and SNPs listed in j.</dd> <dt>coerce</dt><dd><code>signature(from = "raw", to =
	"snp.mx")</code>: makes an snp.mx object out of raw data</dd> <dt>show</dt><dd><code>signature(object = "snp.mx")</code>: shows the object.
      Take care that (a) this is internal representation and (b) 
	the objects are usually very large!</dd> </dl> 

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snp.mx-class: Class "snp.mx"

Description

Arguments

Slots

Methods

See Also