GenVisR (version 1.0.2)

geneViz_extrUTR: Extract UTR

Description

Extract UTR coordinates within a GRanges object given a transcription database

Usage

geneViz_extrUTR(txdb = txdb, gr = gr, reduce = FALSE, gaps = FALSE)

Arguments

txdb

A TxDb object for a genome

gr

A Granges object specifying the region of interest

reduce

Boolean specifying whether to collapse isoforms

gaps

Boolean specifying whether to report space between UTR instead of UTR

Value

• Object of class Granges list