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GeneReg (version 1.0)

timedelay.univariate.lm: Internal function for time delay linear model

Description

timedelay.univariate.lm is an internal function for time delay linear model.

Usage

timedelay.univariate.lm(expr,target,regulator,maxdelay=ncol(expr)*0.25,
univariate.adj.r.squared=0.8,min.coef=0.25)

Arguments

expr
an expression matrix with genes in the rows, time points in the columns
target
target gene
regulator
potential regulators
maxdelay
max time points delay
univariate.adj.r.squared
the cutoff of adjusted R squared of univariate regression
min.coef
the regression coefficient should be larger than min.coef and smaller than 1/min.coef