FormatGenotypes: Formatting file of genotype data.
Description
Takes genotype data as a matrix with
one line per individual and two columns per locus,
with alleles coded by integers (number of replications for
micro-satellites data).
Build a new matrix with alleles codes as consecutive integers.
If a locus has 7 alleles they will be coded as 1,2,...7.
Since version 1.0.1, this function does not have to be called by
users. It is called through MCMC.
Usage
FormatGenotypes(genotypes,ploidy)
Arguments
genotypes
A matrix with
one line per individual and two columns per locus,
with alleles coded by integers