Geneland (version 4.0.6)

PosteriorMode: Map of mode of posterior distribution of population membership

Description

Plots a map giving the modal population as a color code for each pixel.

Usage

PosteriorMode(coordinates,path.mcmc,plotit=TRUE,format="pdf",new.dev=TRUE, printit=FALSE,file,main.title)

Arguments

coordinates

Spatial coordinates of individuals. A matrix with 2 columns and one line per individual.

path.mcmc

Path to output files directory

plotit

Logical: if TRUE the map is plotted

printit

Logical : if TRUE, figures are also printed

format

"ps" or "pdf"

file

Character : Path to file where figures should be printed

main.title

Character : Title to appear on top of the graphic

new.dev

Logical. Open a new graphical device if TRUE and printit is FALSE

References

G. Guillot, Estoup, A., Mortier, F. Cosson, J.F. A spatial statistical model for landscape genetics. Genetics, 170, 1261-1280, 2005.

G. Guillot, Mortier, F., Estoup, A. Geneland : A program for landscape genetics. Molecular Ecology Notes, 5, 712-715, 2005.