GeneticTools (version 0.1)

plot.eqtl: Plot an eqtl Object

Description

The function offers informative plots for an eqtl object.

Usage

## S3 method for class 'eqtl':
plot(x, file=NULL, which=NULL, sig=0.01, ...)

Arguments

x

Object of class eqtl.

file

Store set of graphics under that file name.

which

Specifies for which genes should the plot be created.

sig

Chosen significance level.

...

Additional plotting parameters.

Details

This function plots an eqtl object and all surrounding SNPs.

Examples

# Perform eQTL (single location, one gene):
# myeqtl <- eQTL(geneMatrix,genoData,locs,genoSamples,singleSamples,windowSize,method="LM")

# plot(myeqtl)