create_artificial_genomeadmixr_data

function to generate artificial genomeadmixr_data

Individual-based simulations forward in time,
simulating how patterns in ancestry along the genome change after
admixture. Full description can be found in Janzen (2021)
<doi:10.1111/2041-210X.13612>.

Thijs Janzen

GenomeAdmixR

Simulate Admixture of Genomes

Fernando Diaz G.

Richèl J.C. Bilderbeek

create_artificial_genomeadmixr_data function

<dl><dt>number_of_individuals</dt>
<dd>number of individuals</dd>
<dt>marker_locations</dt>
<dd>location of markers, either in bp or Morgan</dd>
<dt>used_nucleotides</dt>
<dd>subset or full set of [1/2/3/4] (reflecting a/c/t/g)</dd>
<dt>nucleotide_frequencies</dt>
<dd>frequencies of the used nucleotides, if not
provided, equal frequencies are assumed.</dd></dl>

Arguments

function to generate artificial genomeadmixr_data — create_artificial_genomeadmixr_data

<dl>

<dt>number_of_individuals</dt>
<dd>number of individuals</dd>


<dt>marker_locations</dt>
<dd>location of markers, either in bp or Morgan</dd>


<dt>used_nucleotides</dt>
<dd>subset or full set of [1/2/3/4] (reflecting a/c/t/g)</dd>


<dt>nucleotide_frequencies</dt>
<dd>frequencies of the used nucleotides, if not
provided, equal frequencies are assumed.</dd>

</dl>

create_artificial_genomeadmixr_data: function to generate artificial genomeadmixr_data

Description

Usage

Value

Arguments