plink_to_genomeadmixr_data

function to convert plink style (ped/map) data to genome_admixr_data

Individual-based simulations forward in time,
simulating how patterns in ancestry along the genome change after
admixture. Full description can be found in Janzen (2021)
<doi:10.1111/2041-210X.13612>.

Thijs Janzen

GenomeAdmixR

Simulate Admixture of Genomes

Fernando Diaz G.

Richèl J.C. Bilderbeek

plink_to_genomeadmixr_data function

<dl><dt>ped_data</dt>
<dd>result of read.table(ped_file, header = F)</dd>
<dt>map_data</dt>
<dd>result of read.table(map_file, header = F)</dd>
<dt>chosen_chromosome</dt>
<dd>chromosome of choice</dd>
<dt>verbose</dt>
<dd>verbose output</dd></dl>

Arguments

function to convert plink style (ped/map) data to genome_admixr_data — plink_to_genomeadmixr_data

<dl>

<dt>ped_data</dt>
<dd>result of read.table(ped_file, header = F)</dd>


<dt>map_data</dt>
<dd>result of read.table(map_file, header = F)</dd>


<dt>chosen_chromosome</dt>
<dd>chromosome of choice</dd>


<dt>verbose</dt>
<dd>verbose output</dd>

</dl>

plink_to_genomeadmixr_data: function to convert plink style (ped/map) data to genome_admixr_data

Description

Usage

Value

Arguments