Legend-class

drawGD,Legend-method

classes

Genomic data analyses requires integrated visualization of known genomic information and new experimental data.  GenomeGraphs uses the biomaRt package to perform live annotation queries to Ensembl and translates this to e.g. gene/transcript structures in viewports of the grid graphics package. This results in genomic information plotted together with your data.  Another strength of GenomeGraphs is to plot different data types such as array CGH, gene expression, sequencing and other data, together in one plot using the same genome coordinate system.

Steffen Durinck

GenomeGraphs

Plotting genomic information from Ensembl

Legend-class function

Objects can be created by calls of the form <code>new("Legend", ...)</code>.

Objects from the Class

<dl>
    <dt><code>legend</code>:</dt><dd>Object of class <code>"character"</code>, vector with names of the items in the legend</dd> <dt><code>dp</code>:</dt><dd>Object of class <code>"DisplayPars"</code> size of the legend (size), the size of the font (cex) and the colors (color) of the legend</dd> </dl> 

Slots

No methods defined with class "Legend" in the signature.

Legend-class: Class "Legend", represents a legend to add to a plot

Description

Arguments

Objects from the Class

Slots

Methods

References

See Also

Examples