GenomeGraphs (version 1.32.0)

Transcript-class: Represent known transcript isoforms as annoted by Ensembl

Description

Represent known transcript isoforms as annoted by Ensembl

Objects from the Class

Objects can be created by calls of the form new("Transcript", ...).

References

http://www.stat.berkeley.edu/~steffen/

See Also

objects to See Also as gdPlot

Examples

if(interactive()){
data("unrData", package="GenomeGraphs")
mart = useMart("ensembl", dataset="hsapiens_gene_ensembl")
transcript = new("Transcript", id ="ENSG00000009307" , biomart = mart)
gdPlot(list(transcript), minBase = min(exon@probeStart), maxBase=max(exon@probeEnd))
}