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GenomicFeatures (version 1.20.7)

Tools for making and manipulating transcript centric annotations

Description

A set of tools and methods for making and manipulating transcript centric annotations. With these tools the user can easily download the genomic locations of the transcripts, exons and cds of a given organism, from either the UCSC Genome Browser or a BioMart database (more sources will be supported in the future). This information is then stored in a local database that keeps track of the relationship between transcripts, exons, cds and genes. Flexible methods are provided for extracting the desired features in a convenient format.

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Version

1.20.7

License

Artistic-2.0

Last Published

January 1st, 1970

Functions in GenomicFeatures (1.20.7)