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GenomicFiles

Distributed computing by file or by range

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Version

Version

1.2.1

License

Artistic-2.0

Maintainer

Bioconductor Package Maintainer

Last Published

February 15th, 2017

Functions in GenomicFiles (1.2.1)

BamFileViews

Views into a set of BAM files
BigWigFileViews

Views into a set of BigWig files
registry-utils

Functions for creating and searching a registry of file types.
unpack

Un-pack results obtained with a pack()ed group of ranges
FaFileViews

Views into a set of Fasta files
GenomicFiles

GenomicFiles objects
reduceBy

Parallel computations across files or ranges
reduceByYield

Iterate through a BAM (or other) file, reducing output to a single result.
GenomicFileViews

Views into a set of files
pack

Range transformations of a GenomicRanges object for optimal file queries.