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GenomicFiles
Distributed computing by file or by range
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Version
1.8.0
1.6.0
1.4.0
1.2.1
Version
1.4.0
License
Artistic-2.0
Maintainer
Bioconductor Package Maintainer
Last Published
February 15th, 2017
Functions in GenomicFiles (1.4.0)
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reduceByRange
Parallel computations by ranges
reduceByFile
Parallel computations by files
GenomicFileViews
Views into a set of files
pack
Range transformations of a
GenomicRanges
object for optimal file queries.
unpack
Un-pack results obtained with a pack()ed group of ranges
registry-utils
Functions for creating and searching a registry of file types.
reduceByYield
Iterate through a BAM (or other) file, reducing output to a single result.
BamFileViews
Views into a set of BAM files
FaFileViews
Views into a set of Fasta files
GenomicFiles
GenomicFiles objects
BigWigFileViews
Views into a set of BigWig files