GenomicInteractions (version 1.6.2)

plotDists: Plots a histogram of interaction distances for a GInteractions Object

Description

Plots a histogram of interaction distances for a GInteractions Object

Usage

plotDists(GIObject, breaks = c(0, 1000, 5000, 10000, 50000, 1e+05, 5e+05, 1e+06, 2e+06), method = "midpoint")

Arguments

GIObject

A GInteractions object

breaks

A numeric vector of breaks for the histogram

method

Method used for distance between anchors. Passed to calculateDistances. One of "midpoint", "inner", or "outer".

Value

A ggplot2 plot

Examples

data(hic_example_data)
plotDists(hic_example_data)